#include <R_ext/BLAS.h>
#include "Mutils.h"
#include "cs_utils.h"

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Functions
SEXP	compressed_non_0_ij (SEXP x, SEXP colP)
SEXP	compressed_to_TMatrix (SEXP x, SEXP colP)
SEXP	dgCMatrix_cholsol (SEXP x, SEXP y)
SEXP	dgCMatrix_colSums (SEXP x, SEXP NArm, SEXP spRes, SEXP trans, SEXP means)
SEXP	dgCMatrix_LU (SEXP Ap, SEXP orderp, SEXP tolp, SEXP error_on_sing)
SEXP	dgCMatrix_matrix_solve (SEXP Ap, SEXP bp)
SEXP	dgCMatrix_QR (SEXP Ap, SEXP order)
SEXP	dgCMatrix_qrsol (SEXP x, SEXP y, SEXP ord)
SEXP	igCMatrix_colSums (SEXP x, SEXP NArm, SEXP spRes, SEXP trans, SEXP means)
SEXP	lgCMatrix_colSums (SEXP x, SEXP NArm, SEXP spRes, SEXP trans, SEXP means)
SEXP	ngCMatrix_colSums (SEXP x, SEXP NArm, SEXP spRes, SEXP trans, SEXP means)
SEXP	R_to_CMatrix (SEXP x)
SEXP	xCMatrix_validate (SEXP x)
SEXP	xRMatrix_validate (SEXP x)

Function Documentation

SEXP compressed_non_0_ij	(	SEXP	x,
		SEXP	colP
	)

Definition at line 116 of file dgCMatrix.c.

References expand_cmprPt(), Matrix_DimSym, Matrix_iSym, Matrix_jSym, and Matrix_pSym.

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SEXP compressed_to_TMatrix	(	SEXP	x,
		SEXP	colP
	)

Definition at line 36 of file dgCMatrix.c.

References _, ALLOC_SLOT(), class_P, expand_cmprPt(), Matrix_check_class_etc(), Matrix_diagSym, Matrix_DimSym, Matrix_iSym, Matrix_jSym, Matrix_pSym, Matrix_uploSym, MATRIX_VALID_Csparse, MATRIX_VALID_Rsparse, Matrix_xSym, SET_DimNames, and slot_dup.

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SEXP dgCMatrix_cholsol	(	SEXP	x,
		SEXP	y
	)

Definition at line 439 of file dgCMatrix.c.

References _, AS_CHM_DN, AS_CHM_SP, c, and chm_factor_to_SEXP().

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SEXP dgCMatrix_colSums	(	SEXP	x,
		SEXP	NArm,
		SEXP	spRes,
		SEXP	trans,
		SEXP	means
	)

SEXP dgCMatrix_LU	(	SEXP	Ap,
		SEXP	orderp,
		SEXP	tolp,
		SEXP	error_on_sing
	)

Definition at line 384 of file dgCMatrix.c.

References get_factors(), and install_lu().

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SEXP dgCMatrix_matrix_solve	(	SEXP	Ap,
		SEXP	bp
	)

Definition at line 401 of file dgCMatrix.c.

References _, Alloca, AS_CSP__, cs_ipvec(), cs_lsolve(), cs_pvec(), cs_usolve(), dup_mMatrix_as_dgeMatrix(), get_factors(), install_lu(), Matrix_DimSym, Matrix_pSym, Matrix_xSym, and cs_sparse::n.

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SEXP dgCMatrix_QR	(	SEXP	Ap,
		SEXP	order
	)

Definition at line 212 of file dgCMatrix.c.

References _, ALLOC_SLOT(), AS_CSP__, cs_numeric::B, cs_dropzeros(), cs_free(), cs_nfree(), cs_pinv(), cs_qr(), cs_sfree(), cs_spfree(), cs_sqr(), cs_transpose(), cs_numeric::L, cs_sparse::m, Matrix_cs_to_SEXP(), Matrix_DimSym, Matrix_pSym, cs_sparse::n, cs_symbolic::pinv, cs_symbolic::q, and cs_numeric::U.

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SEXP dgCMatrix_qrsol	(	SEXP	x,
		SEXP	y,
		SEXP	ord
	)

Definition at line 162 of file dgCMatrix.c.

References _, AS_CSP, cs_qrsol(), cs_sparse::m, and cs_sparse::n.

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SEXP igCMatrix_colSums	(	SEXP	x,
		SEXP	NArm,
		SEXP	spRes,
		SEXP	trans,
		SEXP	means
	)

SEXP lgCMatrix_colSums	(	SEXP	x,
		SEXP	NArm,
		SEXP	spRes,
		SEXP	trans,
		SEXP	means
	)

Definition at line 528 of file dgCMatrix.c.

SEXP ngCMatrix_colSums	(	SEXP	x,
		SEXP	NArm,
		SEXP	spRes,
		SEXP	trans,
		SEXP	means
	)

Definition at line 536 of file dgCMatrix.c.

SEXP R_to_CMatrix ( SEXP x )

Definition at line 75 of file dgCMatrix.c.

References _, ALLOC_SLOT(), class_P, Csparse_transpose(), Matrix_check_class_etc(), Matrix_diagSym, Matrix_DimSym, Matrix_iSym, Matrix_jSym, Matrix_pSym, Matrix_uploSym, MATRIX_VALID_Rsparse, Matrix_xSym, SET_DimNames, slot_dup, and uplo_P.

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SEXP xCMatrix_validate ( SEXP x )

Definition at line 11 of file dgCMatrix.c.

References _, Matrix_iSym, and Matrix_xSym.

Referenced by tCMatrix_validate().

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SEXP xRMatrix_validate ( SEXP x )

Definition at line 23 of file dgCMatrix.c.

References _, Matrix_jSym, and Matrix_xSym.

Referenced by tRMatrix_validate().

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Functions

Function Documentation